ydaM [2017-05-09 15:36:35]

general stress protein, synthesis of extracellular polysaccharide

locus: BSU04300

pI: 9.73

mw: 49.61 kDa

protein length: 420 aa

gene length: 1260 bp

function: synthesis of extracellular polysaccharide

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]
• [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

Gene

Coordinates: 482,577 → 483,839

The protein

Protein family

• glycosyltransferase family 2 [Pubmed|27897378]

[SW|Localization]

• cell membrane, forms clusters at the cell poles and septa (with [protein|70ED3CE683F3A3F785480F40986CABE7729C17C7|YdaK] and [protein|ADE0122D8FFF2F78B6D21031B7D02A323A13ED63|YdaN]) [Pubmed|27897378]

Expression and Regulation

Operons

• genes: [gene|69DEE29383E40F49890CC8314DFBF56D70D35113|ydaJ]-[gene|70ED3CE683F3A3F785480F40986CABE7729C17C7|ydaK]-[gene|28D80C5497AE29A24AD6B9A1A713A2B3915F2CED|ydaL]-[gene|961538BEDD27C24FC073AFB7AB3268E3D46783CC|ydaM]-[gene|ADE0122D8FFF2F78B6D21031B7D02A323A13ED63|ydaN]
  description: [Pubmed|22383849]

  sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|22383849], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

  regulation

  • expressed during stress ([protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]) [Pubmed|22383849]

Biological materials

Mutant

• MGNA-C076 (ydaM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2074 NBRP B. subtilis, Japan]

References

Reviews

• 28296273

Original publications

• 22383849,27897378